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bioc
tomoseqr:R Package for Analyzing Tomo-seq Data
`tomoseqr` is an R package for analyzing Tomo-seq data. Tomo-seq is a genome-wide RNA tomography method that combines combining high-throughput RNA sequencing with cryosectioning for spatially resolved transcriptomics. `tomoseqr` reconstructs 3D expression patterns from tomo-seq data and visualizes the reconstructed 3D expression patterns.
Maintained by Ryosuke Matsuzawa. Last updated 5 months ago.
geneexpressionsequencingrnaseqtranscriptomicsspatialvisualizationsoftware
4.18 score 15 scripts
phgrosjean
zooimage:Analysis of Numerical Plankton Images
A free (open source) solution for analyzing digital images of plankton. In combination with ImageJ, a free image analysis system, it processes digital images, measures individuals, trains for automatic classification of taxa, and finally, measures plankton samples (abundances, total and partial size spectra or biomasses, etc.).
Maintained by Philippe Grosjean. Last updated 7 years ago.
1.32 score 21 scripts