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bioc
immApex:Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning
A set of tools to build tensorflow/keras3-based models in R from amino acid and nucleotide sequences focusing on adaptive immune receptors. The package includes pre-processing of sequences, unifying gene nomenclature usage, encoding sequences, and combining models. This package will serve as the basis of future immune receptor sequence functions/packages/models compatible with the scRepertoire ecosystem.
Maintained by Nick Borcherding. Last updated 8 days ago.
softwareimmunooncologysinglecellclassificationannotationsequencingmotifannotationcpp
8 stars 5.94 score 3 scripts