Showing 5 of total 5 results (show query)
msberends
AMR:Antimicrobial Resistance Data Analysis
Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in <doi:10.18637/jss.v104.i03>.
Maintained by Matthijs S. Berends. Last updated 2 days ago.
amrantimicrobial-dataepidemiologymicrobiologysoftware
95 stars 11.83 score 182 scripts 6 dependents
kenaho1
asbio:A Collection of Statistical Tools for Biologists
Contains functions from: Aho, K. (2014) Foundational and Applied Statistics for Biologists using R. CRC/Taylor and Francis, Boca Raton, FL, ISBN: 978-1-4398-7338-0.
Maintained by Ken Aho. Last updated 3 months ago.
5 stars 7.32 score 310 scripts 3 dependents
bioc
ProteoMM:Multi-Dataset Model-based Differential Expression Proteomics Analysis Platform
ProteoMM is a statistical method to perform model-based peptide-level differential expression analysis of single or multiple datasets. For multiple datasets ProteoMM produces a single fold change and p-value for each protein across multiple datasets. ProteoMM provides functionality for normalization, missing value imputation and differential expression. Model-based peptide-level imputation and differential expression analysis component of package follows the analysis described in “A statistical framework for protein quantitation in bottom-up MS based proteomics" (Karpievitch et al. Bioinformatics 2009). EigenMS normalisation is implemented as described in "Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition." (Karpievitch et al. Bioinformatics 2009).
Maintained by Yuliya V Karpievitch. Last updated 5 months ago.
immunooncologymassspectrometryproteomicsnormalizationdifferentialexpression
3.38 score 12 scripts
waylandm
aspi:Analysis of Symmetry of Parasitic Infections
Tools for the analysis and visualization of bilateral asymmetry in parasitic infections.
Maintained by Matt Wayland. Last updated 9 years ago.
2.70 score 9 scripts
osmandag
vartest:Tests for Variance Homogeneity
Performs 20 omnibus tests for testing the composite hypothesis of variance homogeneity.
Maintained by Osman Dag. Last updated 11 months ago.
1.48 score 2 scripts