Showing 6 of total 6 results (show query)
tidyverse
purrr:Functional Programming Tools
A complete and consistent functional programming toolkit for R.
Maintained by Hadley Wickham. Last updated 2 months ago.
1.3k stars 22.12 score 59k scripts 6.9k dependents
r-lib
rlang:Functions for Base Types and Core R and 'Tidyverse' Features
A toolbox for working with base types, core R features like the condition system, and core 'Tidyverse' features like tidy evaluation.
Maintained by Lionel Henry. Last updated 5 days ago.
517 stars 20.56 score 9.8k scripts 15k dependents
bioc
decoupleR:decoupleR: Ensemble of computational methods to infer biological activities from omics data
Many methods allow us to extract biological activities from omics data using information from prior knowledge resources, reducing the dimensionality for increased statistical power and better interpretability. Here, we present decoupleR, a Bioconductor package containing different statistical methods to extract these signatures within a unified framework. decoupleR allows the user to flexibly test any method with any resource. It incorporates methods that take into account the sign and weight of network interactions. decoupleR can be used with any omic, as long as its features can be linked to a biological process based on prior knowledge. For example, in transcriptomics gene sets regulated by a transcription factor, or in phospho-proteomics phosphosites that are targeted by a kinase.
Maintained by Pau Badia-i-Mompel. Last updated 5 months ago.
differentialexpressionfunctionalgenomicsgeneexpressiongeneregulationnetworksoftwarestatisticalmethodtranscription
230 stars 11.27 score 316 scripts 3 dependents
yulab-smu
yulab.utils:Supporting Functions for Packages Maintained by 'YuLab-SMU'
Miscellaneous functions commonly used by 'YuLab-SMU'.
Maintained by Guangchuang Yu. Last updated 16 days ago.
33 stars 9.94 score 21 scripts 228 dependents
r-lidar
lasR:Fast and Pipeable Airborne LiDAR Data Tools
Fast and pipeable airborne lidar processing tools. Read/write 'las' and 'laz' files, computation of metrics in area based approach, point filtering, normalization, individual tree segmentation and other manipulations in a powerful and versatile processing chain.
Maintained by Jean-Romain Roussel. Last updated 2 days ago.
19 stars 6.76 score 26 scripts
wanglabcsu
blit:Bioinformatics Library for Integrated Tools
An all-encompassing R toolkit designed to streamline the process of calling various bioinformatics software and then performing data analysis and visualization in R. With 'blit', users can easily integrate a wide array of bioinformatics command line tools into their workflows, leveraging the power of R for sophisticated data manipulation and graphical representation.
Maintained by Yun Peng. Last updated 3 hours ago.
3 stars 4.86 score 3 scripts 1 dependents