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bioc
mariner:Mariner: Explore the Hi-Cs
Tools for manipulating paired ranges and working with Hi-C data in R. Functionality includes manipulating/merging paired regions, generating paired ranges, extracting/aggregating interactions from `.hic` files, and visualizing the results. Designed for compatibility with plotgardener for visualization.
Maintained by Eric Davis. Last updated 5 months ago.
functionalgenomicsvisualizationhic
4.89 score 77 scriptsbioc
plyinteractions:Extending tidy verbs to genomic interactions
Operate on `GInteractions` objects as tabular data using `dplyr`-like verbs. The functions and methods in `plyinteractions` provide a grammatical approach to manipulate `GInteractions`, to facilitate their integration in genomic analysis workflows.
Maintained by Jacques Serizay. Last updated 5 months ago.
4.75 score 14 scripts