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r-forge
ClassComparison:Classes and Methods for "Class Comparison" Problems on Microarrays
Defines the classes used for "class comparison" problems in the OOMPA project (<http://oompa.r-forge.r-project.org/>). Class comparison includes tests for differential expression; see Simon's book for details on typical problem types.
Maintained by Kevin R. Coombes. Last updated 2 months ago.
microarraydifferentialexpressionmultiplecomparisons
6.46 score 44 scripts 3 dependents
cran
RPointCloud:Visualizing Topological Loops and Voids
Visualizations to explain the results of a topological data analysis. The goal of topological data analysis is to identify persistent topological structures, such as loops (topological circles) and voids (topological spheres), in data sets. The output of an analysis using the 'TDA' package is a Rips diagram (named after the mathematician Eliyahu Rips). The goal of 'RPointCloud' is to fill in these holes in the data by providing tools to visualize the features that help explain the structures found in the Rips diagram. See McGee and colleagues (2024) <doi:10.1101/2024.05.16.593927>.
Maintained by Kevin R. Coombes. Last updated 7 months ago.
2.78 score