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bioc
RegionalST:Investigating regions of interest and performing regional cell type-specific analysis with spatial transcriptomics data
This package analyze spatial transcriptomics data through cross-regional cell type-specific analysis. It selects regions of interest (ROIs) and identifys cross-regional cell type-specific differential signals. The ROIs can be selected using automatic algorithm or through manual selection. It facilitates manual selection of ROIs using a shiny application.
Maintained by Ziyi Li. Last updated 4 months ago.
spatialtranscriptomicsreactomekegg
4.30 score 8 scripts