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bioc
altcdfenvs:alternative CDF environments (aka probeset mappings)
Convenience data structures and functions to handle cdfenvs
Maintained by Laurent Gautier. Last updated 5 months ago.
microarrayonechannelqualitycontrolpreprocessingannotationproprietaryplatformstranscription
4.95 score 5 scripts 1 dependentsbioc
Harshlight:A "corrective make-up" program for microarray chips
The package is used to detect extended, diffuse and compact blemishes on microarray chips. Harshlight automatically marks the areas in a collection of chips (affybatch objects) and a corrected AffyBatch object is returned, in which the defected areas are substituted with NAs or the median of the values of the same probe in the other chips in the collection. The new version handle the substitute value as whole matrix to solve the memory problem.
Maintained by Maurizio Pellegrino. Last updated 5 months ago.
microarrayqualitycontrolpreprocessingonechannelreportwriting
4.20 score 2 scripts