Showing 13 of total 13 results (show query)
josie-athens
pubh:A Toolbox for Public Health and Epidemiology
A toolbox for making R functions and capabilities more accessible to students and professionals from Epidemiology and Public Health related disciplines. Includes a function to report coefficients and confidence intervals from models using robust standard errors (when available), functions that expand 'ggplot2' plots and functions relevant for introductory papers in Epidemiology or Public Health. Please note that use of the provided data sets is for educational purposes only.
Maintained by Josie Athens. Last updated 6 months ago.
5 stars 5.73 score 72 scripts
earthlab
cft:Climate Futures Toolbox
Developed as a collaboration between Earth lab and the North Central Climate Adaptation Science Center to help users gain insights from available climate data. Includes tools and instructions for downloading climate data via a 'USGS' API and then organizing those data for visualization and analysis that drive insight. Web interface for 'USGS' API can be found at <http://thredds.northwestknowledge.net:8080/thredds/reacch_climate_CMIP5_aggregated_macav2_catalog.html>.
Maintained by Erick Verleye. Last updated 2 years ago.
4.70 score 50 scripts
andresfloresg
BiVariAn:Bivariate Automatic Analysis
Simplify bivariate and regression analyses by automating result generation, including summary tables, statistical tests, and customizable graphs. It supports tests for continuous and dichotomous data, as well as stepwise regression for linear, logistic, and Firth penalized logistic models. While not a substitute for tailored analysis, 'BiVariAn' accelerates workflows and is expanding features like multilingual interpretations of results.The methods for selecting significant statistical tests, as well as the predictor selection in prediction functions, can be referenced in the works of Marc Kery (2003) <doi:10.1890/0012-9623(2003)84[92:NORDIG]2.0.CO;2> and Rainer Puhr (2017) <doi:10.1002/sim.7273>.
Maintained by José Andrés Flores-García. Last updated 25 days ago.
4.54 score
rfsaldanha
tidyrates:Tidy Epidemiological Rates
Compute age-adjusted rates by direct and indirect methods and other epidemiological indicators in a tidy way, wrapping functions from the 'epitools' package.
Maintained by Raphael Saldanha. Last updated 1 years ago.
1 stars 4.00 score 5 scripts
cran
MultiPhen:A Package to Test for Multi-Trait Association
Performs genetic association tests between SNPs (one-at-a-time) and multiple phenotypes (separately or in joint model).
Maintained by Lachlan Coin. Last updated 5 years ago.
3.70 score
el-meyer
CohortPlat:Simulation of Cohort Platform Trials for Combination Treatments
A collection of functions dedicated to simulating staggered entry platform trials whereby the treatment under investigation is a combination of two active compounds. In order to obtain approval for this combination therapy, superiority of the combination over the two active compounds and superiority of the two active compounds over placebo need to be demonstrated. A more detailed description of the design can be found in Meyer et al. <DOI:10.1002/pst.2194> and a manual in Meyer et al. <arXiv:2202.02182>.
Maintained by Elias Laurin Meyer. Last updated 1 years ago.
clinical-trialsplatform-trialssimulations
3.70 score 3 scripts
virgile-baudrot
morse:Modelling Reproduction and Survival Data in Ecotoxicology
Advanced methods for a valuable quantitative environmental risk assessment using Bayesian inference of survival and reproduction Data. Among others, it facilitates Bayesian inference of the general unified threshold model of survival (GUTS). See our companion paper Baudrot and Charles (2021) <doi:10.21105/joss.03200>, as well as complementary details in Baudrot et al. (2018) <doi:10.1021/acs.est.7b05464> and Delignette-Muller et al. (2017) <doi:10.1021/acs.est.6b05326>.
Maintained by Virgile Baudrot. Last updated 6 months ago.
3.26 score 60 scriptsel-meyer
cats:Cohort Platform Trial Simulation
Cohort plAtform Trial Simulation whereby every cohort consists of two arms, control and experimental treatment. Endpoints are co-primary binary endpoints and decisions are made using either Bayesian or frequentist decision rules. Realistic trial trajectories are simulated and the operating characteristics of the designs are calculated.
Maintained by Elias Laurin Meyer. Last updated 1 years ago.
clinical-trialsplatform-trialssimulations
2.85 score 14 scripts
kartikeyabolar
CMShiny:Interactive Document for Working with Confusion Matrix
An interactive document on the topic of confusion matrix analysis using 'rmarkdown' and 'shiny' packages. Runtime examples are provided in the package function as well as at <https://predanalyticssessions1.shinyapps.io/ConfusionMatrixShiny/>.
Maintained by Kartikeya Bolar. Last updated 5 years ago.
1.00 scorekartikeyabolar
PROBShiny:Interactive Document for Working with Basic Probability
An interactive document on the topic of basic probability using 'rmarkdown' and 'shiny' packages. Runtime examples are provided in the package function as well as at <https://analyticmodels.shinyapps.io/BayesShiny/>.
Maintained by Kartikeya Bolar. Last updated 6 years ago.
1.00 scorekartikeyabolar
CTAShiny:Interactive Application for Working with Contingency Tables
An interactive application for working with contingency Tables. The application has a template for solving contingency table problems like chisquare test of independence,association plot between two categorical variables. Runtime examples are provided in the package function as well as at <https://jarvisatharva.shinyapps.io/CategoricalDataAnalysis/>.
Maintained by Kartikeya Bolar. Last updated 6 years ago.
1.00 score